PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thecc1EG044596t5
Common NameTCM_044596
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
Family bZIP
Protein Properties Length: 303aa    MW: 33765.8 Da    PI: 6.1268
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thecc1EG044596t5genomeCGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.34.5e-15250296450
                       XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                       ++r++r++kNRe+A rsR+RK+a++ eLe+kv  Le+eN +Lk++ e
  Thecc1EG044596t5 250 DRRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENARLKDRKE 296
                       79****************************************97755 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1709.5E-14241296No hitNo description
SMARTSM003387.8E-9247301IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.312249297IPR004827Basic-leucine zipper domain
PfamPF001701.9E-13250298IPR004827Basic-leucine zipper domain
CDDcd147074.97E-23251300No hitNo description
SuperFamilySSF579591.13E-10251297No hitNo description
PROSITE patternPS000360254269IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MGIQTMVSQG DSGSNGKESQ FQQLTRQNSM YSLTLDEVQN QLGDLGKPLS SMNLDELLKN  60
VWTAEANQNY GMETEGTALT NQTALQRQSS LSLTSALSKK TVDEVWRDIQ QSKNDGEKKY  120
RERQPTLGEM TLEDFLVKAG VVAEASTDKK GGGSVAGVDL SVAPQFAQQG QWMQYPQPQY  180
QHPQQSLMGV YMSAQPMPQP LTIGATAVMD VSYPDNQVPL PSPLMGTLSD TQASGRKRGA  240
PEDMIEKNVD RRQKRMIKNR ESAARSRARK QAYTNELENK VSRLEEENAR LKDRKEQEMK  300
LPS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1288296ARLKDRKEQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00409DAPTransfer from AT3G56850Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007010669.10.0BZIP domain class transcription factor isoform 5, partial
SwissprotQ9LES33e-84AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A061FXC80.0A0A061FXC8_THECC; BZIP domain class transcription factor isoform 5 (Fragment)
STRINGPOPTR_0008s01130.11e-171(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.11e-70ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Motamayor JC, et al.
    The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color.
    Genome Biol., 2013. 14(6): p. r53
    [PMID:23731509]